|
|
| Mouse strain information and resources (inbred and mutant) |
|
| International Mouse Strain Resources |
http://www.informatics.jax.org/imsr/index.jsp |
| JAX Mice |
http://jaxmice.jax.org/index.html |
| Federation of International Mouse Resources |
http://www.fimre.org |
| Mouse Mutant Resource |
http://www.jax.org/mmr/index.html |
| Mouse Mutant Regional Resource Centers |
http://www.mmrrc.org |
| Riken Bioresource Center |
http://www.brc.riken.jp/lab/animal/en |
| The European Mouse Archive |
http://www.emmanet.org |
| Mouse Models of Human Cancer Consortium |
http://mouse.ncifcrf.gov |
| Canadian Mouse Mutant Repository |
http://www.cmmr.ca/index.html |
| MUGEN Mutant Mice Database |
http://www.mugen-noe.org/index.php?MODULE=bce/application/pages&Branch=N_N0000000015 |
| Knockout and transgenic mice |
|
| International Gene Trap Consortium |
http://www.genetrap.org |
| Mouse Genome Infomatics Deltagen/Lexicon |
http://www.informatics.jax.org |
| Induced Mutant Resource, Jackson Laboratory |
http://www.jax.org/imr/index.html |
| Samuel Lunenfeld Research Institute |
http://www.mshri.on.ca/nagy |
| Mouse Mutant Regional Resource Centers |
http://www.mmrrc.org |
| Micer |
http://www.sanger.ac.uk/PostGenomics/mousegenomics |
| Sequence/phenotype databases |
|
| Ensembl |
http://www.ensembl.org/Mus_musculus/index.html |
| Map Viewer at NCBI |
http://www.ncbi.nlm.nih.gov/mapview |
| Genome Browser, UCSC |
http://genome.ucsc.edu/cgi-bin/hgGateway |
| Mouse Genome Informatics Database |
http://www.informatics.jax.org |
| Vertebrate Genome Annotation |
http://vega.sanger.ac.uk/index.html |
| Panther |
http://pantherdb.org |
| Mouse Phenome Database |
http://www.jax.org/phenome |
| Eumorphia |
http://www.eumorphia.org |
| Mouse Tumor Biology Database |
http://tumor.informatics.jax.org |
| German Mouse Clinic |
http://www.gsf.de/ieg/gmc |
| Pathways analysis |
|
| Ingenuity |
http://www.ingenuity.com |
| GenMAPP |
http://www.genmapp.org |
| KEGG Pathway Database |
http://www.genome.jp/kegg/pathway.html |
| SNP databases |
|
| Roche |
http://mousesnp.roche.com |
| GNF |
http://snp.gnf.org |
| NCBI |
http://www.ncbi.nlm.nih.gov/SNP |
| Mouse Phenome Database |
http://aretha.jax.org/pub-cgi/phenome/mpdcgi?rtn=snps/door |
| Mouse Genome Informatics Database |
http://www.informatics.jax.org/menus/strain_menu.shtml |
| Perlegen |
http://mouse.perlegen.com/mouse |
| Wellcome Trust Centre for Human Genetics |
http://www.well.ox.ac.uk/mouse/INBREDS |
| Broad Institute |
http://www.broad.mit.edu/personal/claire/MouseHapMap/Inbred.htm |
| Expression databases |
|
| GNF SymAtlas |
http://symatlas.gnf.org |
| Institute for Genomic Research |
http://pga.tigr.org |
| Gene Expression Omnibus |
http://www.ncbi.nlm.nih.gov/geo |
| The Jackson Laboratory |
http://www.informatics.jax.org/menus/expression_menu.shtml |
| Brain Atlas |
http://www.brainatlas.org |
| GenSat |
http://www.gensat.org/index.html |
| EMAGE |
http://genex.hgu.mrc.ac.uk/Emage/database/emageIntro.html |
| Comparative genomics |
|
| VISTA |
http://genome.lbl.gov/vista/index.shtml |
| Mouse Genome Informatics Database |
http://www.informatics.jax.org/menus/homology_menu.shtml |
| Rat Genome Database |
http://www.rgd.mcw.edu/VCMAP/mapview.shtml |
| Quantitative traits analysis |
|
| The Jackson Laboratory, Churchill Laboratory |
http://www.jax.org/staff/churchill/labsite |
| R/qtl |
http://www.biostat.jhsph.edu/~kbroman/qtl |
| Web/QTL |
http://www.genenetwork.org/home.html |
| The Jackson Laboratory PGA |
http://pga.jax.org/resources/index.html |
| The Complex Trait Consortium |
http://www.complextrait.org |
|
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